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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40828970_40830995_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40828970 - 40830995

Intron Length:

2026

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTGA

5'SS Class:

strong_major

3'SS Sequence:

CTTGACTTTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAC

U12 Branch Point Sequence:

CTTTGCTTAAAT

Flanking Amino Acid:

PSMGKRDRNQFNPLSPLYSL

Intron Amino Acid Position:

364

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

38.1

Major BPS

77.3

0.68

79.3

29.4

Major PPT

0.65

0.9

69.3

41.4

Minor 5ss

43.2

-0.7

2.9

56.2

47.9

Minor BPS

67.8

0.64

1.9

85.06

41.4

Associated Gene:

Gene:

GPATCH2L

Ensembl Gene ID:

ENSAPLG00000012320

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038136

40814421 - 40847342

32922

ENSAPLT00000037338

40814421 - 40845432

31012

ENSAPLT00000012837

40798854 - 40845432

46579