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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40831082_40840064_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40831082 - 40840064

Intron Length:

8983

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTCCC

5'SS Class:

strong_major

3'SS Sequence:

AATTTCTCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GCTGTTTTAATT

Flanking Amino Acid:

RRCSPAHCTARQANVHLGPP

Intron Amino Acid Position:

392

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

1.1

69.7

41.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

76.7

0.6

0.8

71.2

34.8

Minor 5ss

-1

2.8

54.5

42.6

Minor BPS

62.1

0.46

1.4

71.21

40.9

Associated Gene:

Gene:

GPATCH2L

Ensembl Gene ID:

ENSAPLG00000012320

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038136

40814421 - 40847342

32922

ENSAPLT00000031424

40814421 - 40845432

31012

ENSAPLT00000012837

40798854 - 40845432

46579