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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40900941_40982213_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

40900941 - 40982213

Intron Length:

81273

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCTC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTGAG

U12 Branch Point Sequence:

AGGCCACTGAGT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.5

0.98

0.8

81.3

32.8

Major BPS

48.9

-0

1.5

46.7

38.9

Major PPT

85.8

0.81

0.7

80.7

24.4

Minor 5ss

33.3

-1.9

43.8

43.9

Minor BPS

40.2

-0.6

53.94

40.9

Associated Gene:

Gene:

ESRRB

Ensembl Gene ID:

ENSAPLG00000012470

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012996

40900911 - 41022180

121270