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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40982624_40992468_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40982624 - 40992468

Intron Length:

9845

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGGTGT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTGATTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

CTGTGTTTGATT

Flanking Amino Acid:

CKAFFKRTIQGNIEYSCPAT

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

70.6

42.2

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

80.4

0.68

0.9

74.1

40.3

Minor 5ss

37.4

-1.4

3.5

48.2

Minor BPS

53.4

0.19

1.8

69.68

42.6

Associated Gene:

Gene:

ESRRB

Ensembl Gene ID:

ENSAPLG00000012470

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026767

40976309 - 41022180

45872

ENSAPLT00000022906

40893874 - 41022180

128307

ENSAPLT00000012996

40900911 - 41022180

121270

ENSAPLT00000031807

40887763 - 41022180

134418

ENSAPLT00000027834

40939432 - 41022180

82749