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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40992586_41005510_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40992586 - 41005510

Intron Length:

12925

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGACAG

5'SS Class:

strong_major

3'SS Sequence:

GTTTTATCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TTTGTTTTATCT

Flanking Amino Acid:

KCLKVGMLKEGVRLDRVRGG

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.9

71.6

40.1

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

83.9

0.76

0.8

78.2

35.3

Minor 5ss

31.3

-2.1

3.1

38.3

46.6

Minor BPS

0.52

1.7

82.72

39.3

Associated Gene:

Gene:

ESRRB

Ensembl Gene ID:

ENSAPLG00000012470

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027834

40939432 - 41022180

82749

ENSAPLT00000026767

40976309 - 41022180

45872

ENSAPLT00000022906

40893874 - 41022180

128307

ENSAPLT00000012996

40900911 - 41022180

121270

ENSAPLT00000031807

40887763 - 41022180

134418