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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41054155_41055799_R

Intron Information:

Intron Rank:

129709

Intron Class:

major

Intron Phase:

Intron Coordinates:

41054155 - 41055799

Intron Length:

1645

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGAAT

5'SS Class:

strong_major

3'SS Sequence:

GCCTCTCTTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTATGGTACACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

80.6

33.5

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

78.8

0.65

0.8

72.4

32.3

Minor 5ss

-1.8

3.2

48.4

47.4

Minor BPS

39.2

-0.8

2.8

58.37

46.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016965

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029371

41026476 - 41059755

33280

ENSAPLT00000026465

41026476 - 41088878

62403