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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41055916_41059656_R

Intron Information:

Intron Rank:

129715

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

41055916 - 41059656

Intron Length:

3741

Sequence Information:

Terminal Dinucleotides:

GT-AA

5'SS Sequence:

GAG|GTAACTTGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTGTAA|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AATAAAT

U12 Branch Point Sequence:

TGTCCAATAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

1.1

73.2

39.3

Major BPS

65.7

0.39

71.3

30.3

Major PPT

48.7

-0

3.2

81.4

30.6

Minor 5ss

46.1

-0.4

2.6

62.1

42.6

Minor BPS

49.6

0.05

74.72

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016965

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029371

41026476 - 41059755

33280