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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41059756_41083805_R

Intron Information:

Intron Rank:

129717

Intron Class:

major

Intron Phase:

Intron Coordinates:

41059756 - 41083805

Intron Length:

24050

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

AATGCTTTGACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TTGTCTTTAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

23.6

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

66.9

0.38

1.1

61.4

43.8

Minor 5ss

36.8

-1.5

2.7

42.6

38.4

Minor BPS

0.71

1.2

74.76

38.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016965

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045598

41058185 - 41084221

26037