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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41144148_41146497_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41144148 - 41146497

Intron Length:

2350

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CTCCCCGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTGAT

U12 Branch Point Sequence:

GAAGCAGTGATT

Flanking Amino Acid:

RSSSLLSLAEIPIPSVPAFQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.8

80.6

31.9

Major BPS

70.8

0.52

1.2

63.4

44.3

Major PPT

75.8

0.58

0.8

72.2

32.4

Minor 5ss

41.4

-1

3.1

45.7

Minor BPS

40.8

-0.6

2.2

54.3

41.3

Associated Gene:

Gene:

VASH1

Ensembl Gene ID:

ENSAPLG00000012819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013355

41144079 - 41151200

7122