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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41146587_41147072_F

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

41146587 - 41147072

Intron Length:

486

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

GTCTTGCCTCCAG|G

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

CCTTAAT

U12 Branch Point Sequence:

AAGCCCTTAATG

Flanking Amino Acid:

EAVQRYIRELQYNHTGTQFF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.2

0.03

1.2

56.4

43.4

Major BPS

74.6

0.61

1.1

75.5

35.1

Major PPT

75.6

0.58

0.9

65.9

Minor 5ss

97.5

1.6

0.6

95.7

13.5

Minor BPS

65.1

0.34

1.4

60.72

41.1

Associated Gene:

Gene:

VASH1

Ensembl Gene ID:

ENSAPLG00000012819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013355

41144079 - 41151200

7122