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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41149676_41150074_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41149676 - 41150074

Intron Length:

399

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTGGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TTTCTGTTTATG

Flanking Amino Acid:

ERHARDMRLKIGKGTGPPSP

Intron Amino Acid Position:

225

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

66.6

39.6

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

81.9

0.72

0.9

81.1

30.9

Minor 5ss

31.2

-2.1

3.3

41.1

45.6

Minor BPS

46.1

-0.4

2.3

60.04

42.1

Associated Gene:

Gene:

VASH1

Ensembl Gene ID:

ENSAPLG00000012819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013355

41144079 - 41151200

7122