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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41163899_41164345_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41163899 - 41164345

Intron Length:

447

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTGAG

5'SS Class:

strong_major

3'SS Sequence:

TGTTCATGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

TCTTGGTAAATT

Flanking Amino Acid:

NDPELQPLIPRSSGVIQHGL

Intron Amino Acid Position:

512

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

74.2

36.3

Major BPS

84.8

0.86

85.7

34.9

Major PPT

75.5

0.57

69.9

40.4

Minor 5ss

32.1

-2

3.1

40.2

45.9

Minor BPS

45.6

-0.2

2.6

70.75

46.9

Associated Gene:

Gene:

ANGEL1

Ensembl Gene ID:

ENSAPLG00000012908

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024778

41129083 - 41170086

41004

ENSAPLT00000013454

41161295 - 41170086

8792