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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41164416_41166088_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41164416 - 41166088

Intron Length:

1673

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGCTCC

5'SS Class:

major

3'SS Sequence:

TGCTCTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TTGTCTGGAATC

Flanking Amino Acid:

YVTRCQPKKQDRPAYWPKHA

Intron Amino Acid Position:

489

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

62.8

38.8

Major BPS

88.7

0.96

0.8

36.5

Major PPT

82.5

0.73

0.8

76.7

31.9

Minor 5ss

39.2

-1.2

2.9

43.1

44.2

Minor BPS

49.6

-0

2.1

66.54

39.9

Associated Gene:

Gene:

ANGEL1

Ensembl Gene ID:

ENSAPLG00000012908

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024778

41129083 - 41170086

41004

ENSAPLT00000013454

41161295 - 41170086

8792