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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41166216_41166897_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41166216 - 41166897

Intron Length:

682

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TGCCTCCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAC

U12 Branch Point Sequence:

TGTTCCTTGCCT

Flanking Amino Acid:

LSYHGMPAWKVSGQEDFSQQ

Intron Amino Acid Position:

447

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

77.2

32.8

Major BPS

73.6

0.59

0.9

63.3

35.6

Major PPT

79.3

0.66

0.8

31.9

Minor 5ss

32.6

-2

3.4

44.1

43.8

Minor BPS

53.4

0.19

3.5

88.2

Associated Gene:

Gene:

ANGEL1

Ensembl Gene ID:

ENSAPLG00000012908

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024778

41129083 - 41170086

41004

ENSAPLT00000013454

41161295 - 41170086

8792