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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41168178_41168743_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41168178 - 41168743

Intron Length:

566

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGAGTATG

5'SS Class:

strong_major

3'SS Sequence:

GCCTTCCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCAAAT

U12 Branch Point Sequence:

TGCTGGTGGAGC

Flanking Amino Acid:

LQEIQHWDPDVLCLQEVQEN

Intron Amino Acid Position:

279

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

79.9

34.9

Major BPS

47.8

-0.1

1.3

41.4

Major PPT

78.4

0.64

0.8

37.1

Minor 5ss

36.3

-1.5

2.9

41.7

Minor BPS

36.1

-1.1

2.5

46.59

Associated Gene:

Gene:

ANGEL1

Ensembl Gene ID:

ENSAPLG00000012908

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013454

41161295 - 41170086

8792

ENSAPLT00000024778

41129083 - 41170086

41004