Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_41183925_41184249_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41183925 - 41184249

Intron Length:

325

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGGAACA

5'SS Class:

major

3'SS Sequence:

TCTCTTCCTGGAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGAGAT

U12 Branch Point Sequence:

CATGCAGCAGCT

Flanking Amino Acid:

GTVAVGTGLRGNGALKILNL

Intron Amino Acid Position:

248

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

65.3

40.7

Major BPS

51.7

0.04

1.3

50.1

44.2

Major PPT

63.8

0.31

1.7

73.2

31.7

Minor 5ss

31.9

-2.1

3.1

32.7

41.8

Minor BPS

36.3

-0.9

2.4

54.44

46.7

Associated Gene:

Gene:

LRRC74A

Ensembl Gene ID:

ENSAPLG00000013057

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013601

41173835 - 41191889

18055