Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_41184445_41185171_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41184445 - 41185171

Intron Length:

727

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAACAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTCCCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTACAT

U12 Branch Point Sequence:

TCACTCTTACTA

Flanking Amino Acid:

EVNGKLEVLKMANNPLTVEG

Intron Amino Acid Position:

313

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

70.2

35.7

Major BPS

70.2

0.5

1.1

77.2

Major PPT

81.7

0.71

0.7

76.4

25.8

Minor 5ss

30.6

-2.2

3.1

38.6

46.4

Minor BPS

53.1

0.09

1.6

60.77

39.8

Associated Gene:

Gene:

LRRC74A

Ensembl Gene ID:

ENSAPLG00000013057

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013601

41173835 - 41191889

18055