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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41343791_41344193_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

41343791 - 41344193

Intron Length:

403

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAAATCT

5'SS Class:

major

3'SS Sequence:

TGTTGATTTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GTTTTGTTGATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

0.9

73.6

30.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

77.3

0.61

0.9

74.4

40.4

Minor 5ss

34.5

-1.8

3.2

48.3

47.4

Minor BPS

57.5

0.32

2.1

78.89

37.8

Associated Gene:

Gene:

CIPC

Ensembl Gene ID:

ENSAPLG00000013142

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031108

41343670 - 41352734

9065