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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41344275_41345703_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

41344275 - 41345703

Intron Length:

1429

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATAGTAT

5'SS Class:

major

3'SS Sequence:

ACTGTTTTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

TTTGTTTTAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

70.7

35.5

Major BPS

89.7

0.98

0.7

89.9

Major PPT

78.4

0.64

0.8

73.4

36.5

Minor 5ss

43.8

-0.7

3.3

63.6

48.1

Minor BPS

78.3

0.97

1.2

90.89

33.1

Associated Gene:

Gene:

CIPC

Ensembl Gene ID:

ENSAPLG00000013142

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031108

41343670 - 41352734

9065

ENSAPLT00000013683

41344194 - 41352971

8778