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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41351625_41352926_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

41351625 - 41352926

Intron Length:

1302

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACATAGC

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTCAG

U12 Branch Point Sequence:

AGTCCCTCCAGT

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

69.7

41.2

Major BPS

47.3

-0.1

1.7

57.1

49.4

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

34.4

-1.8

45.9

42.2

Minor BPS

45.3

-0.2

2.2

65.15

44.8

Associated Gene:

Gene:

CIPC

Ensembl Gene ID:

ENSAPLG00000013142

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013683

41344194 - 41352971

8778