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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41414282_41415057_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41414282 - 41415057

Intron Length:

776

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGGCAT

5'SS Class:

major

3'SS Sequence:

GTTTGGTTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTGAT

U12 Branch Point Sequence:

CTAAGCTTGATG

Flanking Amino Acid:

AIGVKVESFSTVGESLLYML

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

41.1

Major BPS

66.1

0.4

1.3

59.3

47.1

Major PPT

79.8

0.67

72.9

42.2

Minor 5ss

27.5

-2.6

3.3

39.2

46.1

Minor BPS

47.6

-0.3

1.9

51.49

43.4

Associated Gene:

Gene:

NGB

Ensembl Gene ID:

ENSAPLG00000030247

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024828

41413223 - 41417195

3973