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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41429112_41430899_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

41429112 - 41430899

Intron Length:

1788

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGAAGC

5'SS Class:

major

3'SS Sequence:

TTGGCTGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

TTCTCTTCCACT

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.5

1.1

63.6

41.3

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

75.4

0.57

69.1

41.8

Minor 5ss

35.1

-1.7

40.6

39.3

Minor BPS

57.6

0.32

79.65

42.8

Associated Gene:

Gene:

POMT2

Ensembl Gene ID:

ENSAPLG00000013786

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041871

41428908 - 41453927

25020