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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41431035_41431593_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41431035 - 41431593

Intron Length:

559

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

GTTCTTTCCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

TGGTCTCTGATT

Flanking Amino Acid:

ILALVLLIVYSFYLFHPLSY

Intron Amino Acid Position:

706

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.2

0.99

0.7

26.7

Major BPS

0.72

38.9

Major PPT

81.4

0.71

0.8

76.1

32.5

Minor 5ss

29.9

-2.3

3.2

41.3

45.2

Minor BPS

55.1

0.24

1.7

72.08

39.4

Associated Gene:

Gene:

POMT2

Ensembl Gene ID:

ENSAPLG00000013786

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041871

41428908 - 41453927

25020

ENSAPLT00000014436

41430538 - 41453927

23390