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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41431709_41432317_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41431709 - 41432317

Intron Length:

609

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATACA

5'SS Class:

strong_major

3'SS Sequence:

CTCATCCTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAT

U12 Branch Point Sequence:

TGCTCCTGATTT

Flanking Amino Acid:

PAMLFSSMLTGITWDTLLKF

Intron Amino Acid Position:

668

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

83.1

28.6

Major BPS

78.8

0.71

67.6

40.6

Major PPT

74.3

0.55

0.8

65.8

35.9

Minor 5ss

35.4

-1.7

2.7

43.5

43.6

Minor BPS

0.3

1.8

73.56

43.4

Associated Gene:

Gene:

POMT2

Ensembl Gene ID:

ENSAPLG00000013786

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041871

41428908 - 41453927

25020

ENSAPLT00000014436

41430538 - 41453927

23390