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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41432459_41433951_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41432459 - 41433951

Intron Length:

1493

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGTCA

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTGTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAA

U12 Branch Point Sequence:

CCCTGCTGAAGC

Flanking Amino Acid:

RGVQLSSELKELSRVVLHGG

Intron Amino Acid Position:

621

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.9

74.5

31.6

Major BPS

0.42

1.1

57.3

41.7

Major PPT

78.5

0.64

69.2

46.1

Minor 5ss

31.6

-2.1

3.2

38.8

46.5

Minor BPS

44.1

-0.4

2.1

50.11

46.6

Associated Gene:

Gene:

POMT2

Ensembl Gene ID:

ENSAPLG00000013786

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041871

41428908 - 41453927

25020

ENSAPLT00000014436

41430538 - 41453927

23390