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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41434058_41434270_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41434058 - 41434270

Intron Length:

213

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTACGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAA

U12 Branch Point Sequence:

AAGTCCTAAAAG

Flanking Amino Acid:

DYRVYLLGNPVVWWLNLFTI

Intron Amino Acid Position:

586

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

70.1

43.1

Major BPS

72.7

0.57

72.1

31.1

Major PPT

77.2

0.61

0.8

74.3

29.7

Minor 5ss

40.1

-1.1

2.8

50.1

46.1

Minor BPS

52.1

-0

1.9

56.38

44.6

Associated Gene:

Gene:

POMT2

Ensembl Gene ID:

ENSAPLG00000013786

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014436

41430538 - 41453927

23390

ENSAPLT00000041871

41428908 - 41453927

25020