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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41436249_41437566_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41436249 - 41437566

Intron Length:

1318

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTGAGTCAT

5'SS Class:

major

3'SS Sequence:

TTTCTTTCTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

GATTTCTAATCT

Flanking Amino Acid:

WNFEDHINPKLPNISLDVLK

Intron Amino Acid Position:

516

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

88.3

0.86

0.6

85.2

22.2

Minor 5ss

32.4

-2

3.1

44.5

Minor BPS

53.6

0.19

1.9

73.41

43.3

Associated Gene:

Gene:

POMT2

Ensembl Gene ID:

ENSAPLG00000013786

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041871

41428908 - 41453927

25020

ENSAPLT00000014436

41430538 - 41453927

23390