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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41437659_41439201_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41437659 - 41439201

Intron Length:

1543

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAACC

5'SS Class:

strong_major

3'SS Sequence:

TGGTGTTCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTGAC

U12 Branch Point Sequence:

TAGTGTCTGACT

Flanking Amino Acid:

LGSSGKTLPKWGWEQVEVTC

Intron Amino Acid Position:

485

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

74.3

34.1

Major BPS

63.7

0.34

1.2

41.8

Major PPT

72.5

0.51

0.9

69.5

41.6

Minor 5ss

34.9

-1.7

2.9

42.4

38.2

Minor BPS

47.6

-0.1

2.1

68.3

42.9

Associated Gene:

Gene:

POMT2

Ensembl Gene ID:

ENSAPLG00000013786

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041871

41428908 - 41453927

25020

ENSAPLT00000014436

41430538 - 41453927

23390