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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41439354_41440076_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41439354 - 41440076

Intron Length:

723

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTAAGTGAA

5'SS Class:

major

3'SS Sequence:

TTTTCCATGATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TTTTCCATGATA

Flanking Amino Acid:

KHFQVTGYGINGTGDSNDFW

Intron Amino Acid Position:

435

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

73.1

31.1

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

73.2

0.52

70.3

Minor 5ss

33.9

-1.8

3.2

41.6

40.4

Minor BPS

71.8

0.68

1.5

83.53

29.9

Associated Gene:

Gene:

POMT2

Ensembl Gene ID:

ENSAPLG00000013786

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041871

41428908 - 41453927

25020

ENSAPLT00000014436

41430538 - 41453927

23390