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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41440156_41441653_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41440156 - 41441653

Intron Length:

1498

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGGACG

5'SS Class:

major

3'SS Sequence:

AATTTCATTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGACTTTTAATT

Flanking Amino Acid:

HGDIIRLEHKETSRNLHSHQ

Intron Amino Acid Position:

408

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.5

0.46

1.1

60.7

43.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

77.3

0.61

0.9

67.6

42.7

Minor 5ss

33.9

-1.8

3.1

37.7

40.7

Minor BPS

65.6

0.57

1.2

74.54

36.2

Associated Gene:

Gene:

POMT2

Ensembl Gene ID:

ENSAPLG00000013786

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041871

41428908 - 41453927

25020

ENSAPLT00000014436

41430538 - 41453927

23390