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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41441724_41442625_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41441724 - 41442625

Intron Length:

902

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACAAAT

5'SS Class:

strong_major

3'SS Sequence:

CTTCCTCCAGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAG

U12 Branch Point Sequence:

TCTTCCTCCAGC

Flanking Amino Acid:

WIIKKHDSDTDLSDPSSPVE

Intron Amino Acid Position:

385

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

1.1

80.7

33.7

Major BPS

60.9

0.27

1.7

71.4

45.1

Major PPT

74.8

0.56

0.8

70.6

28.8

Minor 5ss

40.7

-1

57.6

46.6

Minor BPS

48.9

-0.1

2.3

66.23

45.6

Associated Gene:

Gene:

POMT2

Ensembl Gene ID:

ENSAPLG00000013786

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041871

41428908 - 41453927

25020

ENSAPLT00000014436

41430538 - 41453927

23390