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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41442693_41444776_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41442693 - 41444776

Intron Length:

2084

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CCTGTGCTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

AATAATTTATCC

Flanking Amino Acid:

PEGVGARQQQVTAYLHKDLN

Intron Amino Acid Position:

363

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

1.1

74.6

37.4

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

72.7

0.51

0.9

69.2

Minor 5ss

30.3

-2.3

2.9

36.8

40.3

Minor BPS

48.7

-0.1

1.8

59.94

38.7

Associated Gene:

Gene:

POMT2

Ensembl Gene ID:

ENSAPLG00000013786

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041871

41428908 - 41453927

25020

ENSAPLT00000014436

41430538 - 41453927

23390