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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41444887_41445750_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41444887 - 41445750

Intron Length:

864

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTGAGTGCC

5'SS Class:

major

3'SS Sequence:

CCTTCCTGTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTTAT

U12 Branch Point Sequence:

GCTGCCTTATGC

Flanking Amino Acid:

NNLHNVSVPEHLAYGSVVTM

Intron Amino Acid Position:

326

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.3

0.34

1.3

60.2

39.4

Major BPS

61.1

0.28

1.3

53.6

43.8

Major PPT

74.2

0.54

0.9

72.9

31.9

Minor 5ss

29.4

-2.4

31.4

35.2

Minor BPS

48.5

-0.1

58.42

46.5

Associated Gene:

Gene:

POMT2

Ensembl Gene ID:

ENSAPLG00000013786

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041871

41428908 - 41453927

25020

ENSAPLT00000014436

41430538 - 41453927

23390