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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41446902_41449593_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41446902 - 41449593

Intron Length:

2692

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

GTGTTTATTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TTGTGTTTATTA

Flanking Amino Acid:

DLLGNLSLSLVMFGKHLLAR

Intron Amino Acid Position:

263

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.8

77.5

30.7

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

79.7

0.67

0.9

73.3

40.8

Minor 5ss

31.9

-2.1

3.3

40.3

40.2

Minor BPS

0.03

66.28

41.4

Associated Gene:

Gene:

POMT2

Ensembl Gene ID:

ENSAPLG00000013786

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041871

41428908 - 41453927

25020

ENSAPLT00000014436

41430538 - 41453927

23390