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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41451868_41453008_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41451868 - 41453008

Intron Length:

1141

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGGCGT

5'SS Class:

major

3'SS Sequence:

TCTTTTCCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCATAAT

U12 Branch Point Sequence:

TCTCCCATAATC

Flanking Amino Acid:

EQHNYMGMRGFCAFLGSCLV

Intron Amino Acid Position:

137

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

1.1

64.3

47.1

Major BPS

62.9

0.32

1.2

63.9

38.4

Major PPT

89.5

0.89

0.6

22.6

Minor 5ss

-2.1

3.4

39.3

Minor BPS

64.2

0.42

1.6

72.87

38.1

Associated Gene:

Gene:

POMT2

Ensembl Gene ID:

ENSAPLG00000013786

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041871

41428908 - 41453927

25020

ENSAPLT00000014436

41430538 - 41453927

23390