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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41453114_41453490_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41453114 - 41453490

Intron Length:

377

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAACGGC

5'SS Class:

major

3'SS Sequence:

TTTGTTTCCGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CCTTTTTTATTT

Flanking Amino Acid:

FFDVHPPLGKMLIGLAGYLS

Intron Amino Acid Position:

102

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

63.9

41.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.79

0.8

80.9

31.1

Minor 5ss

-1.6

3.4

50.2

46.4

Minor BPS

57.3

0.31

1.6

70.13

42.3

Associated Gene:

Gene:

POMT2

Ensembl Gene ID:

ENSAPLG00000013786

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041871

41428908 - 41453927

25020

ENSAPLT00000014436

41430538 - 41453927

23390