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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41453576_41453709_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41453576 - 41453709

Intron Length:

134

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTACGGGCA

5'SS Class:

major

3'SS Sequence:

TTGTCTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAG

U12 Branch Point Sequence:

TTTGTCTTCAGG

Flanking Amino Acid:

FHRLPEPPHVCWDETHFGKM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.1

59.6

39.4

Major BPS

63.4

0.33

1.6

73.6

41.8

Major PPT

0.85

0.8

80.8

36.8

Minor 5ss

28.6

-2.5

3.6

35.6

43.2

Minor BPS

48.4

-0.2

2.2

61.99

46.3

Associated Gene:

Gene:

POMT2

Ensembl Gene ID:

ENSAPLG00000013786

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041871

41428908 - 41453927

25020

ENSAPLT00000014436

41430538 - 41453927

23390