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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41468693_41470391_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

41468693 - 41470391

Intron Length:

1699

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGTGGCG

5'SS Class:

major

3'SS Sequence:

GGTCCTGTCGAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTATTTTTACAC

Flanking Amino Acid:

AGRHAGAHPQLLRGISSSTP

Intron Amino Acid Position:

340

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.6

0.41

1.1

55.3

41.1

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

56.4

0.14

1.1

55.6

39.2

Minor 5ss

28.2

-2.5

3.6

38.5

46.7

Minor BPS

55.8

0.16

1.7

67.66

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014349

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014950

41462095 - 41484108

22014