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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41480226_41480507_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41480226 - 41480507

Intron Length:

282

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCCT

5'SS Class:

strong_major

3'SS Sequence:

TCCCTTGTCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

AGCTGCTGATCT

Flanking Amino Acid:

TADLLGEQRKAQPPPLAPPT

Intron Amino Acid Position:

142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

72.1

39.1

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

77.2

0.61

0.8

75.4

Minor 5ss

27.9

-2.5

3.2

39.3

46.1

Minor BPS

46.2

-0.2

2.1

63.98

45.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014349

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014950

41462095 - 41484108

22014