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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41481708_41483835_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

41481708 - 41483835

Intron Length:

2128

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAGGGAGC

5'SS Class:

major

3'SS Sequence:

CTTCCTCCGAGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTAAA

U12 Branch Point Sequence:

AAGTGCTAAATT

Flanking Amino Acid:

EPSEPSASQCGSQIRSPVSV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.47

1.1

60.5

41.2

Major BPS

70.1

0.5

1.1

69.9

35.3

Major PPT

50.8

0.02

1.7

35.2

Minor 5ss

30.8

-2.2

3.3

33.7

42.2

Minor BPS

49.3

0.03

2.1

67.06

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014349

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014950

41462095 - 41484108

22014