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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41488082_41490556_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

41488082 - 41490556

Intron Length:

2475

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCATCTTTT

5'SS Class:

major

3'SS Sequence:

GTGGCTGTAAGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAATCAT

U12 Branch Point Sequence:

TATTGCTCAAAT

Flanking Amino Acid:

LQKHLALLYQPAGPGTLSEE

Intron Amino Acid Position:

331

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

1.2

72.7

44.5

Major BPS

71.6

0.54

33.1

Major PPT

45.5

-0.2

1.7

46.4

44.8

Minor 5ss

47.4

-0.2

3.8

75.5

40.6

Minor BPS

56.2

0.27

2.1

79.18

42.3

Associated Gene:

Gene:

NOXRED1

Ensembl Gene ID:

ENSAPLG00000014469

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015071

41488034 - 41496878

8845