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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41490732_41491337_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

41490732 - 41491337

Intron Length:

606

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTGCGAGAG

5'SS Class:

weak_major

3'SS Sequence:

TCAGACACTGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTCAA

U12 Branch Point Sequence:

AAGACCAGAAAA

Flanking Amino Acid:

AEQKASCPRFEKTLFGKLLA

Intron Amino Acid Position:

272

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.14

1.1

46.9

37.7

Major BPS

85.7

0.89

0.8

85.9

22.5

Major PPT

52.6

0.06

1.1

50.3

37.8

Minor 5ss

24.5

-2.9

3.3

24.9

38.2

Minor BPS

44.3

-0.4

1.8

51.82

38.6

Associated Gene:

Gene:

NOXRED1

Ensembl Gene ID:

ENSAPLG00000014469

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015071

41488034 - 41496878

8845