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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41491861_41492477_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41491861 - 41492477

Intron Length:

617

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAACGG

5'SS Class:

major

3'SS Sequence:

CGTTTGTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGGCAC

U12 Branch Point Sequence:

TCTGGCACACCC

Flanking Amino Acid:

YSLVTAVPLPRLKQLLCYNA

Intron Amino Acid Position:

170

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

59.7

45.1

Major BPS

45.1

-0.3

1.4

52.4

43.3

Major PPT

83.3

0.75

0.9

80.3

37.3

Minor 5ss

30.7

-2.2

3.1

39.3

45.9

Minor BPS

38.1

-0.9

2.3

Associated Gene:

Gene:

NOXRED1

Ensembl Gene ID:

ENSAPLG00000014469

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015071

41488034 - 41496878

8845