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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41493173_41493429_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

41493173 - 41493429

Intron Length:

257

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTACTGCAT

5'SS Class:

weak_major

3'SS Sequence:

AAACGGGACCGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACCAAAC

U12 Branch Point Sequence:

TTCCCCAGACCA

Flanking Amino Acid:

RLLQHRALPKEAVPTSLVGS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.6

0.23

1.1

56.3

42.5

Major BPS

48.4

-0.1

52.9

28.9

Major PPT

39.1

-0.6

1.6

24.3

Minor 5ss

33.1

-1.9

3.6

Minor BPS

46.5

-0.2

62.88

42.9

Associated Gene:

Gene:

NOXRED1

Ensembl Gene ID:

ENSAPLG00000014469

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015071

41488034 - 41496878

8845