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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41511548_41511902_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

41511548 - 41511902

Intron Length:

355

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTTGTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAA

U12 Branch Point Sequence:

GGCTTGTTAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

74.9

35.3

Major BPS

72.1

0.55

1.2

63.7

43.9

Major PPT

80.7

0.69

0.8

80.7

31.3

Minor 5ss

27.6

-2.6

32.2

42.5

Minor BPS

56.4

0.28

2.1

72.8

44.1

Associated Gene:

Gene:

AHSA1

Ensembl Gene ID:

ENSAPLG00000015078

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015739

41511439 - 41554388

42950