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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41513711_41514003_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41513711 - 41514003

Intron Length:

293

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATAAA

5'SS Class:

strong_major

3'SS Sequence:

GTTGTTTTGTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

TGTTTTTCAGTT

Flanking Amino Acid:

QVAPKAEDRKKAASSSSATS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.8

85.6

24.6

Major BPS

0.65

1.5

85.7

34.9

Major PPT

0.52

73.5

41.9

Minor 5ss

34.4

-1.8

2.8

41.8

44.8

Minor BPS

51.6

0.13

1.7

72.29

39.3

Associated Gene:

Gene:

AHSA1

Ensembl Gene ID:

ENSAPLG00000015078

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015739

41511439 - 41554388

42950