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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41514139_41514879_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41514139 - 41514879

Intron Length:

741

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATTCCA

5'SS Class:

strong_major

3'SS Sequence:

GAATTCTTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTAAT

U12 Branch Point Sequence:

GTCTCCTGAATT

Flanking Amino Acid:

ELYRVFVTQEMVQAFTHAQA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

73.5

37.2

Major BPS

67.8

0.44

1.1

67.7

36.5

Major PPT

77.5

0.62

0.9

73.8

41.1

Minor 5ss

34.6

-1.8

2.8

42.9

43.8

Minor BPS

71.4

0.75

1.4

81.73

39.8

Associated Gene:

Gene:

AHSA1

Ensembl Gene ID:

ENSAPLG00000015078

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015739

41511439 - 41554388

42950