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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41514982_41515658_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41514982 - 41515658

Intron Length:

677

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGTACC

5'SS Class:

major

3'SS Sequence:

CTCTCTTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTCAA

U12 Branch Point Sequence:

TATTCCTCAATG

Flanking Amino Acid:

GSITGEFVDLVPEKQLVMKW

Intron Amino Acid Position:

132

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

74.3

34.1

Major BPS

73.1

0.58

73.8

32.3

Major PPT

82.7

0.74

0.7

75.7

32.8

Minor 5ss

38.9

-1.3

2.7

34.4

Minor BPS

70.5

0.51

1.6

73.19

39.3

Associated Gene:

Gene:

AHSA1

Ensembl Gene ID:

ENSAPLG00000015078

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015739

41511439 - 41554388

42950