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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41515711_41516100_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41515711 - 41516100

Intron Length:

390

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

TGCTTCCTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

TGCTGCTGACAG

Flanking Amino Acid:

MKWRFKSWPAGHFATITLNF

Intron Amino Acid Position:

149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.5

Major BPS

66.3

0.4

1.1

41.8

Major PPT

73.5

0.53

0.8

65.9

Minor 5ss

37.6

-1.4

2.8

48.3

42.5

Minor BPS

41.1

-0.8

2.1

46.05

Associated Gene:

Gene:

AHSA1

Ensembl Gene ID:

ENSAPLG00000015078

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015739

41511439 - 41554388

42950