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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41527292_41527998_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41527292 - 41527998

Intron Length:

707

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGCCCC

5'SS Class:

major

3'SS Sequence:

TTTCCCTCTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTCTTTTTATTT

Flanking Amino Acid:

SRTCDLPRCPGAEGEMVFPT

Intron Amino Acid Position:

314

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

58.5

40.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

74.9

0.56

75.9

26.6

Minor 5ss

33.8

-1.8

40.2

39.7

Minor BPS

63.6

0.51

1.5

78.46

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028338

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045091

41525098 - 41545224

20127

ENSAPLT00000024291

41525739 - 41530198

4460